Data

Data  Links

Rice Root Response Atlas 

Mauricio A. Reynoso, Alexander T. Borowsky, Germain C. Pauluzzi, Elaine Yeung, Jianhai Zhang, Elide Formentin, Joel Velasco, Sean Cabanlit, Christine Duvenjian, Matthew J. Prior, Garo Z. Akmakjian, Roger B. Deal, Neelima R. Sinha, Siobhan M. Brady, Julia Bailey-Serres
DOI:https://doi.org/10.1016/j.devcel.2022.04.013

Jbrowse Instance

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SpatialHeatmap App


Plasticity Project http://plant-plasticity.github.io/ NSF IOS-1238243 

Multitier evaluation of gene activity in four angiosperms 

Mauricio Reynoso, Kaisa Kajala, Marko Bajic, Donelley West, Germain Pauluzzi....Neelima  Sinha, Siobhan  Brady, Roger Deal, Julia Bailey-Serres; Science
DOI: 10.1126/science.aax8862

Genome Browser Info 

Rice Jbrowse


Plasticity Project http://plant-plasticity.github.io/ NSF IOS-1238243 

Multi-level Gene Regulation in Arabidopsis

Integrative analysis from the epigenome to translatome exposes patterns of dominant nuclear regulation during transient stress.  

Travis Lee and Julia Bailey-Serres;  The Plant  Cell


NSF IOS−1121626, IOS-1238243, MCB-1716913 

Track data now available at TAIR: "Hypoxia Gene Regulation"

http://efp.ucr.edu/

Profiling translatomes of discrete cell populations resolves altered cellular priorities during hypoxia in Arabidopsis

Mustroph et al PNAS (2009) 106 (44) 18843-18848. https://doi.org/10.1073/pnas.0906131106